It creates 3 subdirs (red,green,blue). For every file XXX.bmp it creates red/XXX.bmp blue/XXX.bmp and green/XXX.bmp as monochrome files.
What else... yes I used wavelets in registax, but fairly gentle, so that the images weren't overly processed. I think I stacked about 500 frames each time and set the wavelets to about 10 in the middle layers, left the lower and upper layers alone.
The maximum filter doesn't take any parameters... I assume that it uses a 3x3 or 5x5 filter size, and sets the centre to the largest value.
for ME I used 10 turns at 1.5. I also experimented with LR deconvolution, that might actually be what I used in the last image - 10 turns at 1.5 again.
DP: Yes, you can get the package for Windows. I think that's what Mike has done.
I start with an avi, and I use "VirtualDub" to save the image sequence as a set of bmp's. Each frame in the avi comes out as a BMP file. So you end with a thousand or a few thousand bmp files.
ppmcentre then works from bmp files, processing each frame separately.