Hi Gary, I too had thoughts about a rooftop telescope.
Notwithstanding the opportunities for better 360 viewing, don't forget that less than 30degrees altitude is generally not ideal due to atmopheric interference with seeing conditions.
Rooftop introduces further light pollution and the need to create light shields. This is easy to do.
Another concern is atmospheric seeing interfered by air turbulence due to thermal effects of being on the roof of a house. This can affect the clarity of planets and nebulae for instance, and depending on what your goals are, you may choose a smaller area in the backyard with more limited viewing area. Please read the information in this link:
http://www.ayton.id.au/gary/Science/...Ast_seeing.htm and
http://www.telescope-optics.net/turbulence_error.htm (local air turbulence section)
There is of course the cost and inconvenience of rooftop setup/viewing consideration for most of us, but yours seems easier to set up.
Why don't you first try some viewing in the back yard (if this is an option for you), and contrast the seeing conditions with the rooftop first. Virbations will not be your only concern.
I must say I am out of my league a little here and you would be well advised to seek the response of more seasoned forum contributors/astronomers in this forum. Check also cloudy nights forum for ideas about rooftop observatories.
I suspect from the tone of your query that you are simply asking contributors for advice about how to make it work on the rooftop, rather than asking should you do it on the rooftop. Please clarify your question in this regard for us also.
Regards and good luck,
Murat