I think the worm cycle on my Heq5 is about 8 mins, and you really want at least 5 cycles, so 50mins would be good.
PErecorder is a bit obscure. Once you get your data up ok on the graph you need to tweak the sliders to try and fit the variation + smooth out the fit. If your PE curve has too many blips in it you'll have the mount dancing all over the place. The name of the game is to get PEC that averages out your mounts movement so you've get less distance to chase the star when guiding.
You have to remember to religously park and unpark too so that EQMOD can keep track of your encoder positions....
I still haven't been able to quantitate the improvement PEC makes. Theoretically it helps smooth the fastest excursion points on the worm. Its probably pretty subtle unless you have terrible PE.
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