Get a multimeter and test the lead that you're powering the mount with for starters.. The supply might be fine, but the lead between the supply and mount may be shot, or the inline fuse in that lead...
even with a poor polar alignment, doing a 3 star alignment should work provided you centered the right stars and input the date/time correctly... (Remember its MM/DD/YYYY not DD/MM/YYYY in the hand paddle.)
The fact that the red light is flashing, and the mount will not slew are both indicators of a power issue.. As you say, your power supplies are all good, so check the lead and any other connectors between the supply and the mount... Other than that, I can't think of anything.
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