I have also been using EQMOD as well for a while and was up until a couple of weeks ago using PHD. Now I have switch to using EQAlign for guiding and what a major difference. As I am using a webcam for some reason the dark creation caused a brightening effect on PHD that caused the star to disappear or reduce locking capability. EQAlign now has a excellent dark subtraction for my webcam and my alignments are really great. Aggressiveness in EQMOD is high but easily reduced.
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