Remote desktop does have some limitations - that is the session on the target machine will be logged off and your new session logged on. You therefore cannot control the target machine from its keyboard again until the remote control session is shut down. I have also seen issues with USB devices not recognised if the control program is started remotely as opposed to locally (seen with AA4).
Having said that it works very well for me and it is a boon in the winter to be able to control the scope from the lounge.
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