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All my images are saved in a pictures folder under reverse date order and target name, eg "2015-07-13 dark tower". I have a "Calibration" folder in that base pictures folder, and each camera has directories eg "calibration\qsi583\2015-06-01\darks" for the dates I took the cal frames. The current masters go in the base calibration folder for quicker access eg "calibration\darks_1x1_1800s_40subs _150601.fits" with the masters named so I know exactly what the file was built on and when. Only keep current masters there, and older ones can go in another subfolder if I want to go back and reprocess or something.
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