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I tried that Rick, but it wants a text file specifying the coords for the bad pixels - how do I auto-create the bad pixel map in the first place???
Very frustrated at this point. Almost feel like running the bad pixel map in CCDStack (that is SIMPLE), then putting these cleaned fits into PI to then run the registration and alignment.
The Batch Preprocess script did a good job, but having a very hard time extracting the correct colours from it despite specifying the correct debayer matrix.
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